Informatics Training - May 2016

We are presenting 3 workshops in May 2016.  These are aimed at people with a good grounding in unix and the command line but are new to bioinformatics analysis.

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Basic Unix Workshop

This tutorial is intended for people completely new to unix and command line driven analysis. It introduces how to navigate the unix filesystem, make and delete files and directories and be able to list the contents of files and directories.

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Bauer Sequencing Core

Our core sequencing service has two Illumina HiSeqs and a MiSeq. The FAS Informatics group is committed to providing a fast basecalling and QC service for all users of the facility. Beyond this we strongly encourage people to get in contact with us and we’ll be happy to discuss things further. We aim to work alongside researchers with the intention of spreading knowledge and enabling people to run analyses themselves. As we grow we are building workflows and pipelines to enable more people to be self sufficient in bioinformatics analysis.

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FAS Proteomics Core

We provide sample submission, tracking and result delivery. We can also provide access to common proteomics analysis tools such as ProteomeDiscoverer, MaxQuant and TPP. We’re also happy to install other software as required. For expert advice on analysis techniques we encourage people to contact Bogdan Budnik, Sunia Trauger or Bill Lane in the Proteomics Core.

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Small Molecule Mass Spec Core

The Small Molecule Mass Spec Core offers support for the analysis of a wide variety of analytes using mass spectrometry based techniques. This work is supported by the MiniLIMS platform.

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