Archives for Harvard FAS Informatics

Thu 19 September 2019	Cactus on the FASRC Cluster
Thu 18 July 2019	RSEM example on Odyssey
Wed 19 June 2019	JBrowse on the FASRC Cluster
Tue 18 June 2019	MAKER on the FASRC Cluster
Thu 28 March 2019	How can I download my sequencing data
Thu 07 March 2019	Best Practices for De Novo Transcriptome Assembly with Trinity
Fri 18 January 2019	ATAC-seq Guidelines
Wed 23 May 2018	Python on Cannon
Wed 23 May 2018	Python on Odyssey
Sun 25 March 2018	h5py on Odyssey
Tue 20 March 2018	Differential Expression Workshop, Spring 2018
Tue 06 February 2018	Intermediate R Workshop, Spring 2018
Tue 30 January 2018	Introduction to R Workshop, Spring 2018
Wed 10 January 2018	Data Visualization Workshop, Fall 2017
Wed 10 January 2018	Whole-genome resquencing for population genomics (Fastq to VCF)
Wed 01 November 2017	ATAC-seq Guidelines (old version)
Mon 10 July 2017	PICRUSt on Odyssey
Fri 07 April 2017	Practical Python on Odyssey Slides
Mon 27 March 2017	Practical Python on Odyssey - April 7, 2017
Tue 04 October 2016	Informatics Training - October 2016
Thu 08 September 2016	FASRC & Informatics Open House 2016
Sat 30 April 2016	Informatics Training - May 2016
Tue 22 March 2016	RNA-Seq differential expression workshop
Thu 10 March 2016	Analyzing public ChIP-seq data for orthologs of genes of interest
Mon 08 February 2016	Metatranscriptome analysis example on Odyssey
Thu 04 February 2016	Informatics Training - February 2016
Wed 13 January 2016	Basic Unix Workshop
Fri 01 January 2016	Differential Expression with DESeq2
Fri 01 January 2016	Differential Expression with DESeq2 Mouse Immune Cells
Fri 01 January 2016	Introduction to R Review Workshop
Fri 01 January 2016	Introduction to R Workshop
Fri 01 January 2016	Bauer Sequencing Core
Fri 01 January 2016	FAS Proteomics Core
Fri 01 January 2016	Genome Repository Status
Fri 01 January 2016	Helium Liquefaction & Recovery Core
Fri 01 January 2016	JalView at ISMB 2015
Fri 01 January 2016	Journal Club 2015-09-11
Fri 01 January 2016	Small Molecule Mass Spec Core
Tue 15 December 2015	Kallisto example on Odyssey
Thu 10 December 2015	Sleuth example on Odyssey
Fri 04 December 2015	Journal Club 2015-12-04
Wed 25 November 2015	Trinotate workflow example on Odyssey
Fri 20 November 2015	Journal Club 2015-11-20
Tue 27 October 2015	Informatics Training - November 2015
Fri 23 October 2015	Journal Club 2015-10-23
Tue 13 October 2015	Intermediate Unix Workshop
Fri 09 October 2015	Journal Club 2015-10-09
Tue 06 October 2015	A couple of my fastq.gz files will not decompress, or give errors when I process them. What is wrong?
Tue 06 October 2015	MiniLIMS Activity
Tue 06 October 2015	Minilims LIMS Activity
Tue 06 October 2015	What computing resources are available to FAS and HSPH?
Tue 06 October 2015	What preprocessing has been performed on my sequence data?
Tue 06 October 2015	Why do my R1 and R2 reads align discordantly?
Fri 25 September 2015	Journal Club 2015-09-25
Fri 11 September 2015	PSMC journal club walkthrough
Thu 12 March 2015	Adding a new PD_Method_File
Thu 12 March 2015	Adding a new user email to an existing alert
Thu 12 March 2015	Helium MiniLIMS - Billing Operations
Sat 03 January 2015	Iggytools SeqPrep test process
Thu 01 January 2015	Unix Command Line Tips and Tricks
Thu 01 January 2015	Adding a new Purchase Order
Thu 01 January 2015	Adding a new Sequencing Price
Thu 01 January 2015	Genome and Transcriptome Assembly
Thu 01 January 2015	Genomic Ranges Workshop
Thu 01 January 2015	IGV Workshop
Thu 01 January 2015	Introduction to Bauer Sequencing Core
Thu 01 January 2015	Library Prep
Thu 01 January 2015	MiniLIMS - Downloading a table into a spreadsheet
Thu 01 January 2015	Minilims - Pre-Billing Checks
Thu 01 January 2015	Next-Gen Sequencing Experimental Design
Thu 01 January 2015	Sequencing Core - MiniLIMS Billing Operations
Mon 02 June 2014	Demultiplexing FASTQ files with barcode collision
Fri 21 February 2014	Scripting Tips for Bioinformatics
Tue 21 January 2014	De Novo Assembly: Trinity vs. Oases